STRINGSTRING
PG_0085 protein (Porphyromonas gingivalis W83) - STRING interaction network
"PG_0085" - Alpha-galactosidase in Porphyromonas gingivalis W83
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PG_0085Alpha-galactosidase (434 aa)    
Predicted Functional Partners:
galK
Galactokinase (384 aa)
     
 
    0.804
PG_0232
Zinc carboxypeptidase (821 aa)
   
          0.573
tpr
Thiol protease; Thiol protease. Probably an important virulence factor (481 aa)
   
          0.562
sda
L-serine dehydratase (399 aa)
              0.550
PG_1884
alpha-L-fucosidase (674 aa)
   
        0.530
lacZ-2
Beta-galactosidase (1017 aa)
   
        0.485
PG_0032
Beta-mannosidase (861 aa)
 
        0.477
nahA
Beta-hexosaminidase (777 aa)
   
        0.472
lacZ-1
Beta-galactosidase (1112 aa)
   
        0.456
PG_1792
Sodium/hydrogen antiporter (767 aa)
   
          0.453
Your Current Organism:
Porphyromonas gingivalis W83
NCBI taxonomy Id: 242619
Other names: P. gingivalis W83, Porphyromonas gingivalis W83, Porphyromonas gingivalis str. W83, Porphyromonas gingivalis strain W83
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