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epsD protein (Porphyromonas gingivalis W83) - STRING interaction network
"epsD" - UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase in Porphyromonas gingivalis W83
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
epsDUDP-N-acetyl-D-mannosaminuronic acid dehydrogenase (402 aa)    
Predicted Functional Partners:
epsC
UDP-N-acetylglucosamine 2-epimerase (386 aa)
 
  0.999
PG_1954
NAD dependent epimerase/reductase-like protein (339 aa)
   
  0.926
PG_1504
NAD dependent protein (328 aa)
   
  0.926
fcl
GDP-fucose synthetase; Catalyzes the two-step NADP-dependent conversion of GDP- 4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction (357 aa)
   
  0.926
PG_1235
Epimerase/reductase (318 aa)
   
  0.926
PG_0119
WecB/TagA/CpsF family glycosyl transferase (232 aa)
 
 
  0.915
rfbA
Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis (289 aa)
   
 
  0.888
PG_0111
Capsular polysacharride biosynthesis gene (422 aa)
 
     
  0.843
PG_0109
Hypothetical protein (407 aa)
         
  0.836
PG_0106
Glycosyl transferase (378 aa)
   
   
  0.785
Your Current Organism:
Porphyromonas gingivalis W83
NCBI taxonomy Id: 242619
Other names: P. gingivalis W83, Porphyromonas gingivalis W83, Porphyromonas gingivalis str. W83, Porphyromonas gingivalis strain W83
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