STRINGSTRING
PG_0125 protein (Porphyromonas gingivalis W83) - STRING interaction network
"PG_0125" - Hypothetical protein in Porphyromonas gingivalis W83
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PG_0125Hypothetical protein (182 aa)    
Predicted Functional Partners:
PG_0126
Type I phosphodiesterase/nucleotide pyrophosphatase (411 aa)
              0.859
PG_0124
Hypothetical protein (206 aa)
              0.859
PG_1352
Hypothetical protein (137 aa)
   
          0.778
PG_1139
Hypothetical protein (378 aa)
   
          0.777
PG_2149
Hypothetical protein (240 aa)
   
          0.742
PG_0980
Hypothetical protein (745 aa)
   
          0.736
PG_2094
Hypothetical protein (1515 aa)
   
          0.735
PG_1945
Hypothetical protein (147 aa)
   
          0.723
PG_0241
Putative lipoprotein (284 aa)
   
          0.704
PG_1304
Hypothetical protein (446 aa)
   
          0.673
Your Current Organism:
Porphyromonas gingivalis W83
NCBI taxonomy Id: 242619
Other names: P. gingivalis W83, Porphyromonas gingivalis W83, Porphyromonas gingivalis str. W83, Porphyromonas gingivalis strain W83
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