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PG_0139 protein (Porphyromonas gingivalis W83) - STRING interaction network
"PG_0139" - Lytic murein transglycosylase D in Porphyromonas gingivalis W83
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PG_0139Lytic murein transglycosylase D (451 aa)    
Predicted Functional Partners:
PG_0140
Hypothetical protein (235 aa)
              0.884
spo0J
spoOJ protein (289 aa)
   
   
  0.858
soj
SpoOJ regulator protein (258 aa)
   
        0.854
nahA
Beta-hexosaminidase (777 aa)
         
  0.786
dacB
D-alanyl-D-alanine carboxypeptidase (510 aa)
         
  0.739
polA
DNA polymerase type I (926 aa)
     
 
  0.655
PG_0191
Outer membrane protein (891 aa)
 
      0.606
PG_0658
YrbI family phosphatase (173 aa)
 
   
  0.590
PG_2044
Hypothetical protein (251 aa)
   
          0.565
PG_0922
Hypothetical protein (407 aa)
   
        0.533
Your Current Organism:
Porphyromonas gingivalis W83
NCBI taxonomy Id: 242619
Other names: P. gingivalis W83, Porphyromonas gingivalis W83, Porphyromonas gingivalis str. W83, Porphyromonas gingivalis strain W83
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