STRINGSTRING
PG_0140 protein (Porphyromonas gingivalis W83) - STRING interaction network
"PG_0140" - Hypothetical protein in Porphyromonas gingivalis W83
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PG_0140Hypothetical protein (235 aa)    
Predicted Functional Partners:
PG_0139
Lytic murein transglycosylase D (451 aa)
              0.884
spo0J
spoOJ protein (289 aa)
              0.856
soj
SpoOJ regulator protein (258 aa)
              0.855
PG_1999
Hypothetical protein (212 aa)
 
          0.808
PG_2214
Hypothetical protein (424 aa)
   
          0.778
PG_0980
Hypothetical protein (745 aa)
   
          0.776
PG_0448
Hypothetical protein (434 aa)
   
          0.773
PG_1405
Hypothetical protein (951 aa)
   
          0.769
PG_0147
Hypothetical protein (179 aa)
   
          0.767
PG_1215
Lipoprotein (270 aa)
   
          0.755
Your Current Organism:
Porphyromonas gingivalis W83
NCBI taxonomy Id: 242619
Other names: P. gingivalis W83, Porphyromonas gingivalis W83, Porphyromonas gingivalis str. W83, Porphyromonas gingivalis strain W83
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