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soj protein (Porphyromonas gingivalis W83) - STRING interaction network
"soj" - SpoOJ regulator protein in Porphyromonas gingivalis W83
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sojSpoOJ regulator protein (258 aa)    
Predicted Functional Partners:
spo0J
spoOJ protein (289 aa)
 
  0.994
PG_0140
Hypothetical protein (235 aa)
              0.855
PG_0139
Lytic murein transglycosylase D (451 aa)
   
        0.854
xerC
Integrase/recombinase XerD (308 aa)
 
   
  0.800
dnaA
Chromosomal replication initiation protein; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box)- 5’-TTATC[CA]A[CA]A-3’. DnaA binds to ATP and to acidic phospholipids (473 aa)
   
 
  0.799
PG_1579
MoxR family ATPase (331 aa)
   
 
    0.791
dnaB
Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity (528 aa)
   
   
  0.615
PG_0386
Phage integrase site specific recombinase; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules (400 aa)
 
   
  0.605
ssb
ssDNA-binding protein (156 aa)
   
   
  0.592
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP (506 aa)
         
  0.577
Your Current Organism:
Porphyromonas gingivalis W83
NCBI taxonomy Id: 242619
Other names: P. gingivalis W83, Porphyromonas gingivalis W83, Porphyromonas gingivalis str. W83, Porphyromonas gingivalis strain W83
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