STRINGSTRING
PG_0156 protein (Porphyromonas gingivalis W83) - STRING interaction network
"PG_0156" - HemK family modification methylase in Porphyromonas gingivalis W83
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PG_0156HemK family modification methylase (293 aa)    
Predicted Functional Partners:
prfA
Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA (361 aa)
 
  0.996
ribD
Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5’-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5’-phosphate (330 aa)
         
  0.905
PG_0158
Competence protein F-like protein (246 aa)
              0.887
recX
Regulatory protein RecX; Modulates RecA activity (161 aa)
              0.887
PG_0475
Oxygen-independent coproporphyrinogen III oxidase (376 aa)
 
 
    0.870
PG_1579
MoxR family ATPase (331 aa)
       
    0.819
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX (345 aa)
       
  0.812
PG_1768
Magnesium chelatase subunit D/I family protein (513 aa)
       
    0.809
PG_2109
Thiamine-phosphate pyrophosphorylase (647 aa)
       
    0.794
pth
peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis (185 aa)
 
        0.792
Your Current Organism:
Porphyromonas gingivalis W83
NCBI taxonomy Id: 242619
Other names: P. gingivalis W83, Porphyromonas gingivalis W83, Porphyromonas gingivalis str. W83, Porphyromonas gingivalis strain W83
Server load: low (6%) [HD]