STRINGSTRING
recX protein (Porphyromonas gingivalis W83) - STRING interaction network
"recX" - Regulatory protein RecX in Porphyromonas gingivalis W83
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
recXRegulatory protein RecX; Modulates RecA activity (161 aa)    
Predicted Functional Partners:
PG_0158
Competence protein F-like protein (246 aa)
              0.887
PG_0156
HemK family modification methylase (293 aa)
              0.887
ribD
Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5’-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5’-phosphate (330 aa)
              0.695
PG_2144
Hypothetical protein (1099 aa)
   
          0.627
PG_0649
Hypothetical protein (194 aa)
   
          0.582
PG_1778
Hypothetical protein (262 aa)
   
          0.538
ispG
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (581 aa)
           
  0.529
PG_0147
Hypothetical protein (179 aa)
   
          0.523
PG_2022
Hypothetical protein (847 aa)
   
          0.513
PG_0980
Hypothetical protein (745 aa)
   
          0.500
Your Current Organism:
Porphyromonas gingivalis W83
NCBI taxonomy Id: 242619
Other names: P. gingivalis W83, Porphyromonas gingivalis W83, Porphyromonas gingivalis str. W83, Porphyromonas gingivalis strain W83
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