STRINGSTRING
PG_0172 protein (Porphyromonas gingivalis W83) - STRING interaction network
"PG_0172" - Exonuclease in Porphyromonas gingivalis W83
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PG_0172Exonuclease (260 aa)    
Predicted Functional Partners:
PG_0171
5’-nucleotidase (590 aa)
              0.859
PG_0411
Hemagglutinin (925 aa)
   
          0.760
metG
methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation (680 aa)
              0.758
PG_0582
Cell division protein FtsQ (258 aa)
   
          0.747
PG_0569
Hypothetical protein (508 aa)
   
          0.705
PG_2216
Hypothetical protein (576 aa)
   
          0.699
hagE
Hemagglutinin protein HagE (1706 aa)
   
          0.696
PG_0149
Hypothetical protein (422 aa)
   
          0.647
PG_1427
Thiol protease/hemagglutinin PrtT (843 aa)
   
          0.643
PG_0300
Hypothetical protein (430 aa)
   
          0.640
Your Current Organism:
Porphyromonas gingivalis W83
NCBI taxonomy Id: 242619
Other names: P. gingivalis W83, Porphyromonas gingivalis W83, Porphyromonas gingivalis str. W83, Porphyromonas gingivalis strain W83
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