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ompH-1 protein (Porphyromonas gingivalis W83) - STRING interaction network
"ompH-1" - Cationic outer membrane protein OmpH in Porphyromonas gingivalis W83
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ompH-1Cationic outer membrane protein OmpH (174 aa)    
Predicted Functional Partners:
ompH-2
Cationic outer membrane protein OmpH (163 aa)
 
     
  0.954
PG_0191
Outer membrane protein (891 aa)
 
          0.849
uppS
Undecaprenyl diphosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids (254 aa)
              0.763
PG_1405
Hypothetical protein (951 aa)
   
          0.616
PG_0189
Hypothetical protein (235 aa)
 
          0.593
PG_1049
Hypothetical protein (292 aa)
   
          0.551
PG_1850
Hypothetical protein (302 aa)
   
     
  0.550
PG_0809
Hypothetical protein (2316 aa)
   
          0.517
PG_1145
long-chain-fatty-acid--CoA ligase (607 aa)
   
          0.516
PG_0188
Putative lipoprotein (456 aa)
              0.505
Your Current Organism:
Porphyromonas gingivalis W83
NCBI taxonomy Id: 242619
Other names: P. gingivalis W83, Porphyromonas gingivalis W83, Porphyromonas gingivalis str. W83, Porphyromonas gingivalis strain W83
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