STRINGSTRING
ompH-2 protein (Porphyromonas gingivalis W83) - STRING interaction network
"ompH-2" - Cationic outer membrane protein OmpH in Porphyromonas gingivalis W83
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ompH-2Cationic outer membrane protein OmpH (163 aa)    
Predicted Functional Partners:
ompH-1
Cationic outer membrane protein OmpH (174 aa)
 
     
  0.954
PG_0191
Outer membrane protein (891 aa)
 
          0.848
murD
UDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) (450 aa)
   
   
    0.824
uppS
Undecaprenyl diphosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids (254 aa)
              0.718
PG_0003
Hypothetical protein (339 aa)
   
          0.668
PG_0452
Hypothetical protein (715 aa)
   
          0.667
PG_1430
Hypothetical protein (228 aa)
   
          0.646
PG_0189
Hypothetical protein (235 aa)
 
          0.645
PG_0286
Hypothetical protein (85 aa)
   
          0.610
PG_0731
Hypothetical protein (218 aa)
   
          0.555
Your Current Organism:
Porphyromonas gingivalis W83
NCBI taxonomy Id: 242619
Other names: P. gingivalis W83, Porphyromonas gingivalis W83, Porphyromonas gingivalis str. W83, Porphyromonas gingivalis strain W83
Server load: low (6%) [HD]