STRINGSTRING
PG_0223 protein (Porphyromonas gingivalis W83) - STRING interaction network
"PG_0223" - Exonuclease in Porphyromonas gingivalis W83
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PG_0223Exonuclease (163 aa)    
Predicted Functional Partners:
dnaN
DNA polymerase III subunit beta; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3’ to 5’ exonuclease activity. The beta chain is required for initiation of replication once it is clamped onto DNA, it slides freely (bidirectional and ATP- independent) along duplex DNA (377 aa)
     
  0.970
dnaE
DNA polymerase III subunit alpha (1228 aa)
     
  0.945
dnaX
DNA polymerase III subunits gamma and tau (602 aa)
     
  0.939
PG_0801
poly(A) polymerase (483 aa)
   
 
    0.860
PG_0224
Hypothetical protein (212 aa)
              0.859
rnr
Ribonuclease R; 3’-5’ exoribonuclease that releases 5’-nucleoside monophosphates and is involved in maturation of structured RNAs (702 aa)
     
  0.853
rplJ
Ribosomal protein L10 (174 aa)
     
 
  0.853
pnp
Polynucleotide phosphorylase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3’- to 5’-direction (743 aa)
   
  0.829
PG_0932
DNA polymerase III, delta prime subunit (416 aa)
     
  0.825
PG_2099
DEAD/DEAH box helicase (427 aa)
     
    0.822
Your Current Organism:
Porphyromonas gingivalis W83
NCBI taxonomy Id: 242619
Other names: P. gingivalis W83, Porphyromonas gingivalis W83, Porphyromonas gingivalis str. W83, Porphyromonas gingivalis strain W83
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