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ssb protein (Porphyromonas gingivalis W83) - STRING interaction network
"ssb" - ssDNA-binding protein in Porphyromonas gingivalis W83
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ssbssDNA-binding protein (156 aa)    
Predicted Functional Partners:
dnaE
DNA polymerase III subunit alpha (1228 aa)
   
 
  0.991
dnaX
DNA polymerase III subunits gamma and tau (602 aa)
   
 
  0.918
dnaG
DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication (673 aa)
     
 
  0.897
rpsR
Ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit (90 aa)
   
   
  0.844
priA
Primosomal protein N’; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA (837 aa)
   
 
 
  0.843
rpsF
Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA (117 aa)
   
   
  0.841
dnaB
Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity (528 aa)
   
   
  0.775
recJ
single-stranded-DNA-specific exonuclease RecJ (584 aa)
 
 
 
  0.765
PG_0272
Hypothetical protein (419 aa)
              0.758
cdsA
Phosphatidate cytidylyltransferase (284 aa)
         
  0.741
Your Current Organism:
Porphyromonas gingivalis W83
NCBI taxonomy Id: 242619
Other names: P. gingivalis W83, Porphyromonas gingivalis W83, Porphyromonas gingivalis str. W83, Porphyromonas gingivalis strain W83
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