STRINGSTRING
PG_0280 protein (Porphyromonas gingivalis W83) - STRING interaction network
"PG_0280" - ABC transporter permease in Porphyromonas gingivalis W83
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PG_0280ABC transporter permease (442 aa)    
Predicted Functional Partners:
PG_0281
ABC transporter permease (458 aa)
 
     
  0.954
PG_0283
RND family efflux transporter MFP subunit (416 aa)
 
          0.893
PG_0746
Sensor histidine kinase (455 aa)
 
          0.825
PG_0285
Hypothetical protein (501 aa)
 
          0.821
PG_0282
ABC transporter ATP-binding protein (223 aa)
 
     
  0.801
PG_1301
Hypothetical protein (271 aa)
   
          0.776
PG_1316
Hypothetical protein (176 aa)
   
          0.768
PG_1652
Hypothetical protein (596 aa)
   
          0.767
PG_0607
Hypothetical protein (120 aa)
   
          0.766
PG_1308
Hypothetical protein (281 aa)
   
          0.761
Your Current Organism:
Porphyromonas gingivalis W83
NCBI taxonomy Id: 242619
Other names: P. gingivalis W83, Porphyromonas gingivalis W83, Porphyromonas gingivalis str. W83, Porphyromonas gingivalis strain W83
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