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dprA protein (Porphyromonas gingivalis W83) - STRING interaction network
"dprA" - DNA processing protein DprA in Porphyromonas gingivalis W83
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dprADNA processing protein DprA (374 aa)    
Predicted Functional Partners:
PG_1768
Magnesium chelatase subunit D/I family protein (513 aa)
 
  0.885
purL
Phosphoribosylformylglycinamidine synthase; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate (1234 aa)
              0.866
PG_0294
Glycosyl transferase group 2 family protein (296 aa)
   
        0.825
topA
DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5’-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3’-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA super [...] (788 aa)
            0.816
PG_0158
Competence protein F-like protein (246 aa)
 
 
  0.706
rnhB
Ribonuclease HII; Endonuclease that specifically degrades the RNA of RNA- DNA hybrids (201 aa)
 
          0.630
PG_1690
Sua5/YciO/YrdC/YwlC family protein (200 aa)
 
   
  0.573
PG_1097
Putative bifunctional UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase/alanine racemase (823 aa)
   
   
  0.550
recA
recA protein; Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage (340 aa)
       
 
  0.547
PG_1594
ComEC/Rec2-like protein (511 aa)
 
   
  0.514
Your Current Organism:
Porphyromonas gingivalis W83
NCBI taxonomy Id: 242619
Other names: P. gingivalis W83, Porphyromonas gingivalis W83, Porphyromonas gingivalis str. W83, Porphyromonas gingivalis strain W83
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