STRINGSTRING
PG_0308 protein (Porphyromonas gingivalis W83) - STRING interaction network
"PG_0308" - RnfABCDGE type electron transport complex subunit A in Porphyromonas gingivalis W83
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PG_0308RnfABCDGE type electron transport complex subunit A; Part of a membrane complex involved in electron transport (190 aa)    
Predicted Functional Partners:
PG_0305
RnfABCDGE type electron transport complex subunit D; Part of a membrane complex involved in electron transport (327 aa)
 
   
  0.973
PG_0304
RnfABCDGE type electron transport complex subunit C; Part of a membrane complex involved in electron transport (443 aa)
 
   
  0.970
PG_0306
RnfABCDGE type electron transport complex subunit G; Part of a membrane complex involved in electron transport (215 aa)
 
   
  0.964
PG_0303
Ferredoxin (290 aa)
 
   
  0.951
PG_0307
Electron transport complex protein RsxE; Part of a membrane complex involved in electron transport (196 aa)
 
   
0.897
apbE
Thiamine biosynthesis lipoprotein ApbE; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein (337 aa)
 
          0.622
PG_0302
Hypothetical protein (140 aa)
              0.586
nqrB
Na(+)-translocating NADH-quinone reductase subunit B; NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol (399 aa)
   
   
  0.567
metG
methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation (680 aa)
              0.537
nth
Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3’ to the AP site by a beta-elimination, leaving a 3’-terminal unsaturated sugar and a product with a terminal 5’-phosphate (224 aa)
         
  0.467
Your Current Organism:
Porphyromonas gingivalis W83
NCBI taxonomy Id: 242619
Other names: P. gingivalis W83, Porphyromonas gingivalis W83, Porphyromonas gingivalis str. W83, Porphyromonas gingivalis strain W83
Server load: low (11%) [HD]