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PG_0322 protein (Porphyromonas gingivalis W83) - STRING interaction network
"PG_0322" - Serine/threonine transporter in Porphyromonas gingivalis W83
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PG_0322Serine/threonine transporter (392 aa)    
Predicted Functional Partners:
PG_0321
Arginine/ornithine transport system ATPase (343 aa)
              0.759
PG_1591
Hypothetical protein (365 aa)
       
      0.586
maeB
Malic enzyme (759 aa)
   
   
  0.540
PG_0320
Hypothetical protein (362 aa)
              0.478
sda
L-serine dehydratase (399 aa)
   
        0.430
PG_0319
Hypothetical protein (142 aa)
              0.426
aroC
Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system (368 aa)
              0.414
PG_0909
Hypothetical protein (433 aa)
              0.414
rplW
Ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome (97 aa)
     
      0.408
Your Current Organism:
Porphyromonas gingivalis W83
NCBI taxonomy Id: 242619
Other names: P. gingivalis W83, Porphyromonas gingivalis W83, Porphyromonas gingivalis str. W83, Porphyromonas gingivalis strain W83
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