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PG_0329 protein (Porphyromonas gingivalis W83) - STRING interaction network
"PG_0329" - Formiminotransferase-cyclodeaminase-like protein in Porphyromonas gingivalis W83
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PG_0329Formiminotransferase-cyclodeaminase-like protein (300 aa)    
Predicted Functional Partners:
PG_0325
Hypothetical protein (209 aa)
   
    0.997
hutI
Imidazolonepropionase (423 aa)
   
 
  0.952
hutU
Urocanate hydratase (659 aa)
 
   
  0.838
PG_0330
Histone-like family DNA-binding protein (171 aa)
              0.695
hutH
Histidine ammonia-lyase (497 aa)
   
   
  0.665
PG_0327
Hypothetical protein (384 aa)
              0.428
PG_0326
Hypothetical protein (411 aa)
              0.428
fhs
Formate--tetrahydrofolate ligase (555 aa)
              0.414
rlmH
rRNA large subunit methyltransferase; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA (157 aa)
              0.400
Your Current Organism:
Porphyromonas gingivalis W83
NCBI taxonomy Id: 242619
Other names: P. gingivalis W83, Porphyromonas gingivalis W83, Porphyromonas gingivalis str. W83, Porphyromonas gingivalis strain W83
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