STRINGSTRING
PG_0336 protein (Porphyromonas gingivalis W83) - STRING interaction network
"PG_0336" - Hypothetical protein in Porphyromonas gingivalis W83
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PG_0336Hypothetical protein (189 aa)    
Predicted Functional Partners:
miaA1
tRNA delta(2)-isopentenylpyrophosphate transferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) (300 aa)
              0.881
PG_0366
Hypothetical protein (186 aa)
   
          0.776
PG_0961
Hypothetical protein (109 aa)
   
          0.773
PG_0624
Hypothetical protein (168 aa)
 
          0.769
PG_0759
Hypothetical protein (717 aa)
   
          0.766
PG_0055
Hypothetical protein (351 aa)
   
          0.765
PG_1651
Hypothetical protein (995 aa)
   
          0.757
PG_1388
Hypothetical protein (264 aa)
   
          0.749
PG_0413
Hypothetical protein (114 aa)
   
          0.693
recO
DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination (245 aa)
   
          0.664
Your Current Organism:
Porphyromonas gingivalis W83
NCBI taxonomy Id: 242619
Other names: P. gingivalis W83, Porphyromonas gingivalis W83, Porphyromonas gingivalis str. W83, Porphyromonas gingivalis strain W83
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