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pyrI protein (Porphyromonas gingivalis W83) - STRING interaction network
"pyrI" - Aspartate carbamoyltransferase in Porphyromonas gingivalis W83
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pyrIAspartate carbamoyltransferase; Involved in allosteric regulation of aspartate carbamoyltransferase (151 aa)    
Predicted Functional Partners:
pyrB
Aspartate carbamoyltransferase (304 aa)
  0.999
carB
Carbamoyl-phosphate synthase large subunit (1075 aa)
   
 
    0.990
pyrC
Dihydroorotase (449 aa)
       
    0.988
carA
Carbamoyl phosphate synthase small subunit (357 aa)
   
 
    0.988
purL
Phosphoribosylformylglycinamidine synthase; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate (1234 aa)
       
    0.809
PG_0359
Flavin reductase domain-containing protein (195 aa)
              0.775
PG_2034
ferredoxin-NADP(+) reductase subunit alpha (263 aa)
       
    0.707
PG_1064
Dihydroorotate dehydrogenase (265 aa)
       
    0.707
PG_0356
Hypothetical protein (260 aa)
              0.677
PG_0355
Hypothetical protein (327 aa)
              0.677
Your Current Organism:
Porphyromonas gingivalis W83
NCBI taxonomy Id: 242619
Other names: P. gingivalis W83, Porphyromonas gingivalis W83, Porphyromonas gingivalis str. W83, Porphyromonas gingivalis strain W83
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