STRINGSTRING
PG_0399 protein (Porphyromonas gingivalis W83) - STRING interaction network
"PG_0399" - Putative lipoprotein in Porphyromonas gingivalis W83
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PG_0399Putative lipoprotein (176 aa)    
Predicted Functional Partners:
PG_0400
Hypothetical protein (427 aa)
              0.864
recF
recF protein; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP (364 aa)
              0.859
PG_0397
Hypothetical protein (96 aa)
              0.824
PG_1301
Hypothetical protein (271 aa)
   
          0.634
PG_0759
Hypothetical protein (717 aa)
   
          0.611
PG_1679
Hypothetical protein (464 aa)
   
          0.606
PG_1651
Hypothetical protein (995 aa)
   
          0.542
PG_1302
Hypothetical protein (232 aa)
   
          0.530
PG_1215
Lipoprotein (270 aa)
   
          0.525
PG_1537
Hypothetical protein (99 aa)
   
          0.516
Your Current Organism:
Porphyromonas gingivalis W83
NCBI taxonomy Id: 242619
Other names: P. gingivalis W83, Porphyromonas gingivalis W83, Porphyromonas gingivalis str. W83, Porphyromonas gingivalis strain W83
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