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rny protein (Porphyromonas gingivalis W83) - STRING interaction network
"rny" - Phosphodiesterase in Porphyromonas gingivalis W83
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
rnyPhosphodiesterase; Endoribonuclease that initiates mRNA decay (513 aa)    
Predicted Functional Partners:
PG_0400
Hypothetical protein (427 aa)
 
          0.860
PG_1256
Ribonuclease (504 aa)
       
    0.740
PG_1091
DHH subfamily 1 protein (331 aa)
 
   
  0.733
PG_0801
poly(A) polymerase (483 aa)
 
   
    0.613
PG_1636
FtsK/SpoIIIE family protein (861 aa)
 
          0.582
rnz
Ribonuclease Z; Zinc phosphodiesterase, which displays some tRNA 3’- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3’-trailer from precursor tRNA (304 aa)
         
  0.562
rplE
Ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs (186 aa)
 
   
  0.557
pheT
phenylalanyl-tRNA synthetase subunit beta (819 aa)
              0.538
PG_0404
Hypothetical protein (112 aa)
              0.536
PG_0403
Hypothetical protein; Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division (102 aa)
              0.536
Your Current Organism:
Porphyromonas gingivalis W83
NCBI taxonomy Id: 242619
Other names: P. gingivalis W83, Porphyromonas gingivalis W83, Porphyromonas gingivalis str. W83, Porphyromonas gingivalis strain W83
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