STRINGSTRING
pepT protein (Porphyromonas gingivalis W83) - STRING interaction network
"pepT" - Peptidase T in Porphyromonas gingivalis W83
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pepTPeptidase T; Cleaves the N-terminal amino acid of tripeptides (405 aa)    
Predicted Functional Partners:
PG_0444
OPT family oligopeptide transporter (659 aa)
         
  0.884
PG_1271
Acetylornithine aminotransferase (409 aa)
       
  0.847
PG_1522
Mandelate racemase/muconate lactonizing enzyme family protein; Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB) (356 aa)
       
    0.773
lacZ-1
Beta-galactosidase (1112 aa)
       
 
  0.562
thiF
thiF protein (235 aa)
              0.555
PG_2043
Hypothetical protein (364 aa)
              0.538
rgp2
Arginine-specific cysteine proteinase; Thiol protease which is believed to participate in intracellular degradation and turnover of proteins. Its proteolytic activity is a major factor in both periodontal tissue destruction and in bacterial host defense mechanisms. Activates complement C3 and C5 (By similarity) (736 aa)
           
  0.526
lacZ-2
Beta-galactosidase (1017 aa)
       
 
  0.501
PG_0032
Beta-mannosidase (861 aa)
       
 
  0.482
PG_0443
Hemagglutinin-like protein (348 aa)
              0.478
Your Current Organism:
Porphyromonas gingivalis W83
NCBI taxonomy Id: 242619
Other names: P. gingivalis W83, Porphyromonas gingivalis W83, Porphyromonas gingivalis str. W83, Porphyromonas gingivalis strain W83
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