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thiF protein (Porphyromonas gingivalis W83) - STRING interaction network
thiF protein in Porphyromonas gingivalis W83
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
thiFthiF protein (235 aa)    
Predicted Functional Partners:
PG_2109
Thiamine-phosphate pyrophosphorylase (647 aa)
 
   
  0.911
PG_1571
Metallo-beta-lactamase superfamily protein (471 aa)
   
 
  0.905
PG_1693
HesA/MoeB/ThiF family protein (249 aa)
 
0.875
PG_0735
Class V aminotransferase (404 aa)
   
 
  0.832
PG_1713
Putative lipoprotein (134 aa)
   
 
  0.818
PG_1570
Rhodanese-like domain-containing protein (127 aa)
   
 
  0.818
PG_2158
Hypothetical protein (141 aa)
     
 
  0.805
PG_1751
Class V aminotransferase (376 aa)
   
 
  0.805
thiG
thiG protein; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S (259 aa)
   
  0.795
dnaN
DNA polymerase III subunit beta; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3’ to 5’ exonuclease activity. The beta chain is required for initiation of replication once it is clamped onto DNA, it slides freely (bidirectional and ATP- independent) along duplex DNA (377 aa)
   
    0.775
Your Current Organism:
Porphyromonas gingivalis W83
NCBI taxonomy Id: 242619
Other names: P. gingivalis W83, Porphyromonas gingivalis W83, Porphyromonas gingivalis str. W83, Porphyromonas gingivalis strain W83
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