STRINGSTRING
PG_0541 protein (Porphyromonas gingivalis W83) - STRING interaction network
"PG_0541" - Hypothetical protein in Porphyromonas gingivalis W83
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PG_0541Hypothetical protein (99 aa)    
Predicted Functional Partners:
PG_0539
RND family efflux transporter MFP subunit (350 aa)
 
     
  0.978
PG_0540
AcrB/AcrD/AcrF family protein (1049 aa)
 
     
  0.952
PG_0538
Outer membrane efflux protein (462 aa)
 
     
  0.924
PG_1802
Hypothetical protein (312 aa)
   
          0.710
PG_0781
Hypothetical protein (156 aa)
   
          0.700
PG_1382
Hypothetical protein (379 aa)
   
          0.673
PG_0706
Hypothetical protein (150 aa)
   
          0.610
PG_0302
Hypothetical protein (140 aa)
   
          0.608
PG_1801
V-type ATPase subunit E (196 aa)
   
          0.605
PG_0838
Integrase (432 aa)
   
          0.593
Your Current Organism:
Porphyromonas gingivalis W83
NCBI taxonomy Id: 242619
Other names: P. gingivalis W83, Porphyromonas gingivalis W83, Porphyromonas gingivalis str. W83, Porphyromonas gingivalis strain W83
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