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htrA protein (Porphyromonas gingivalis W83) - STRING interaction network
htrA protein in Porphyromonas gingivalis W83
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
htrAhtrA protein (498 aa)    
Predicted Functional Partners:
upp
Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate (216 aa)
   
    0.834
rpoD
RNA polymerase sigma-70 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released (287 aa)
 
 
  0.834
PG_0627
RNA-binding protein (97 aa)
     
  0.826
PG_2200
Hypothetical protein (695 aa)
   
    0.812
PG_1967
Hypothetical protein (295 aa)
   
    0.812
PG_0982
Hypothetical protein (750 aa)
   
    0.812
PG_0300
Hypothetical protein (430 aa)
   
    0.812
PG_1176
ABC transporter ATP-binding protein (573 aa)
         
  0.807
PG_1175
ABC transporter ATP-binding protein (568 aa)
         
  0.807
PG_1719
ABC transporter ATP-binding protein (616 aa)
         
  0.801
Your Current Organism:
Porphyromonas gingivalis W83
NCBI taxonomy Id: 242619
Other names: P. gingivalis W83, Porphyromonas gingivalis W83, Porphyromonas gingivalis str. W83, Porphyromonas gingivalis strain W83
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