STRINGSTRING
PG_0621 protein (Porphyromonas gingivalis W83) - STRING interaction network
"PG_0621" - Hypothetical protein in Porphyromonas gingivalis W83
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PG_0621Hypothetical protein (182 aa)    
Predicted Functional Partners:
PG_0622
Hypothetical protein (430 aa)
              0.887
lon
ATP-dependent protease La; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner (810 aa)
              0.863
tpiA
Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) (251 aa)
              0.833
PG_1367
Hypothetical protein (200 aa)
   
          0.775
PG_1999
Hypothetical protein (212 aa)
   
          0.754
PG_0482
Hypothetical protein (143 aa)
   
          0.732
PG_0414
Hypothetical protein (626 aa)
 
          0.708
PG_0731
Hypothetical protein (218 aa)
   
          0.702
PG_0582
Cell division protein FtsQ (258 aa)
   
          0.683
PG_0202
uroporphyrinogen-III synthase (248 aa)
   
          0.674
Your Current Organism:
Porphyromonas gingivalis W83
NCBI taxonomy Id: 242619
Other names: P. gingivalis W83, Porphyromonas gingivalis W83, Porphyromonas gingivalis str. W83, Porphyromonas gingivalis strain W83
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