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fetB protein (Porphyromonas gingivalis W83) - STRING interaction network
"fetB" - Heme-binding protein FetB in Porphyromonas gingivalis W83
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fetBHeme-binding protein FetB (293 aa)    
Predicted Functional Partners:
cbiGF
Cobalamin biosynthesis protein CbiG/precorrin-4 C11-methyltransferase (614 aa)
   
  0.995
cobL
precorrin-6Y C5,15-methyltransferase (413 aa)
 
   
  0.952
cbiA
Cobyrinic acid a,c-diamide synthase (439 aa)
 
   
  0.950
PG_0480
Precorrin-2 C20-methyltransferase (237 aa)
   
  0.947
PG_0213
Precorrin-3 methylase/precorrin-8X methylmutase (468 aa)
 
     
  0.922
cbiD
Precorrin-6x reductase; Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A (602 aa)
 
     
  0.919
PG_0671
Iron ABC transporter permease (356 aa)
 
          0.772
PG_0668
TonB-dependent receptor (757 aa)
              0.765
PG_0670
Putative lipoprotein (379 aa)
 
          0.762
cbiB
Cobalamin biosynthesis protein CbiB; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group (336 aa)
 
     
  0.747
Your Current Organism:
Porphyromonas gingivalis W83
NCBI taxonomy Id: 242619
Other names: P. gingivalis W83, Porphyromonas gingivalis W83, Porphyromonas gingivalis str. W83, Porphyromonas gingivalis strain W83
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