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PG_0679 protein (Porphyromonas gingivalis W83) - STRING interaction network
"PG_0679" - Outer membrane efflux protein in Porphyromonas gingivalis W83
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PG_0679Outer membrane efflux protein (444 aa)    
Predicted Functional Partners:
PG_0680
RND family efflux transporter MFP subunit (417 aa)
 
          0.949
PG_0684
ABC transporter permease (791 aa)
 
          0.748
PG_0682
ABC transporter permease (783 aa)
 
          0.673
PG_0683
ABC transporter permease (788 aa)
 
          0.623
PG_1666
RND family efflux transporter MFP subunit (368 aa)
 
          0.581
PG_0017
Sensor histidine kinase (445 aa)
 
          0.565
PG_1581
Hypothetical protein (318 aa)
   
     
  0.560
PG_0678
Pyrazinamidase/nicotinamidase (170 aa)
              0.494
PG_0055
Hypothetical protein (351 aa)
   
          0.480
PG_1778
Hypothetical protein (262 aa)
   
          0.439
Your Current Organism:
Porphyromonas gingivalis W83
NCBI taxonomy Id: 242619
Other names: P. gingivalis W83, Porphyromonas gingivalis W83, Porphyromonas gingivalis str. W83, Porphyromonas gingivalis strain W83
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