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4hbD protein (Porphyromonas gingivalis W83) - STRING interaction network
"4hbD" - NAD-dependent 4-hydroxybutyrate dehydrogenase in Porphyromonas gingivalis W83
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
4hbDNAD-dependent 4-hydroxybutyrate dehydrogenase (371 aa)    
Predicted Functional Partners:
sucD
Succinate-semialdehyde dehydrogenase (451 aa)
 
  0.998
abfT-1
4-hydroxybutyrate CoA-transferase (431 aa)
       
  0.940
pruA
Delta-1-pyrroline-5-carboxylate dehydrogenase (543 aa)
 
 
  0.885
maeB
Malic enzyme (759 aa)
   
 
  0.885
PG_0691
NifU-like protein (94 aa)
 
          0.857
PG_1151
Iron-containing alcohol dehydrogenase (382 aa)
   
   
0.856
PG_1162
ATP-cob(I)alamin adenosyltransferase (188 aa)
   
 
  0.838
PG_1124
ATP-cob(I)alamin adenosyltransferase (183 aa)
   
 
  0.838
deoC
Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate (289 aa)
       
  0.828
abfT-2
4-hydroxybutyrate CoA-transferase (431 aa)
       
  0.816
Your Current Organism:
Porphyromonas gingivalis W83
NCBI taxonomy Id: 242619
Other names: P. gingivalis W83, Porphyromonas gingivalis W83, Porphyromonas gingivalis str. W83, Porphyromonas gingivalis strain W83
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