STRINGSTRING
PG_0707 protein (Porphyromonas gingivalis W83) - STRING interaction network
"PG_0707" - TonB-dependent receptor in Porphyromonas gingivalis W83
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PG_0707TonB-dependent receptor (848 aa)    
Predicted Functional Partners:
PG_1555
Hypothetical protein (192 aa)
 
 
  0.803
PG_0631
MotA/TolQ/ExbB proton channel family protein (204 aa)
 
 
  0.788
PG_0782
MotA/TolQ/ExbB proton channel family protein (270 aa)
 
 
  0.779
pyrG
CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen (539 aa)
       
      0.726
feoB1
Ferrous iron transport protein B; Fe(2+) uptake system, probably driven by GTP (844 aa)
   
   
  0.694
PG_1553
CobN/magnesium chelatase (1469 aa)
 
        0.623
PG_0671
Iron ABC transporter permease (356 aa)
   
 
  0.584
PG_0821
Putative lipoprotein (120 aa)
   
          0.580
PG0821
Putative lipoprotein (120 aa)
   
          0.580
PG_0538
Outer membrane efflux protein (462 aa)
 
     
  0.575
Your Current Organism:
Porphyromonas gingivalis W83
NCBI taxonomy Id: 242619
Other names: P. gingivalis W83, Porphyromonas gingivalis W83, Porphyromonas gingivalis str. W83, Porphyromonas gingivalis strain W83
Server load: low (5%) [HD]