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PG_0740 protein (Porphyromonas gingivalis W83) - STRING interaction network
"PG_0740" - NLP/P60 family protein in Porphyromonas gingivalis W83
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PG_0740NLP/P60 family protein (189 aa)    
Predicted Functional Partners:
rnz
Ribonuclease Z; Zinc phosphodiesterase, which displays some tRNA 3’- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3’-trailer from precursor tRNA (304 aa)
              0.862
PG_0076
N-acetylmuramoyl-L-alanine amidase (313 aa)
       
  0.813
murC
UDP-N-acetylmuramate--alanine ligase; Cell wall formation (456 aa)
       
    0.810
PG_1048
N-acetylmuramoyl-L-alanine amidase (396 aa)
       
  0.802
PG_2038
N-acetylmuramoyl-L-alanine amidase (132 aa)
   
 
    0.789
tadA
Cytidine/deoxycytidylate deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) (150 aa)
              0.749
PG_0737
Hypothetical protein (92 aa)
              0.748
rnhB
Ribonuclease HII; Endonuclease that specifically degrades the RNA of RNA- DNA hybrids (201 aa)
              0.748
PG_0735
Class V aminotransferase (404 aa)
              0.732
PG_0011
Glycosyl hydrolase (1003 aa)
       
  0.726
Your Current Organism:
Porphyromonas gingivalis W83
NCBI taxonomy Id: 242619
Other names: P. gingivalis W83, Porphyromonas gingivalis W83, Porphyromonas gingivalis str. W83, Porphyromonas gingivalis strain W83
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