STRINGSTRING
PG_0785 protein (Porphyromonas gingivalis W83) - STRING interaction network
"PG_0785" - tonB protein in Porphyromonas gingivalis W83
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PG_0785tonB protein (230 aa)    
Predicted Functional Partners:
PG_0786
Hypothetical protein (40 aa)
              0.859
PG_0649
Hypothetical protein (194 aa)
   
          0.766
PG_0779
Hypothetical protein (157 aa)
 
          0.753
PG_2022
Hypothetical protein (847 aa)
   
          0.747
PG_0780
Hypothetical protein (204 aa)
 
          0.736
PG_0448
Hypothetical protein (434 aa)
   
          0.732
PG_1626
Hypothetical protein (554 aa)
   
          0.700
PG_0191
Outer membrane protein (891 aa)
   
          0.689
PG_0133
Hypothetical protein (501 aa)
   
          0.688
PG_1977
Hypothetical protein (668 aa)
   
          0.675
Your Current Organism:
Porphyromonas gingivalis W83
NCBI taxonomy Id: 242619
Other names: P. gingivalis W83, Porphyromonas gingivalis W83, Porphyromonas gingivalis str. W83, Porphyromonas gingivalis strain W83
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