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PG_0807 protein (Porphyromonas gingivalis W83) - STRING interaction network
"PG_0807" - NusB family protein in Porphyromonas gingivalis W83
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PG_0807NusB family protein; Involved in the transcription termination process (364 aa)    
Predicted Functional Partners:
rpsJ
Ribosomal protein S10; Involved in the binding of tRNA to the ribosomes (101 aa)
       
 
  0.916
ribBA
3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate (405 aa)
   
 
  0.796
ribD
Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5’-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5’-phosphate (330 aa)
   
   
  0.775
PG_0806
Gfo/Idh/MocA family oxidoreductase; Catalyzes the reversible NADPH-dependent reductive amination of L-2-amino-6-oxopimelate, the acyclic form of L- tetrahydrodipicolinate, to generate the meso compound, D,L-2,6- diaminopimelate (301 aa)
              0.728
ribH
Riboflavin synthase, beta subunit; Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin (161 aa)
   
   
  0.719
lgt
Prolipoprotein diacylglyceryl transferase; Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins (283 aa)
              0.624
polA
DNA polymerase type I (926 aa)
 
   
  0.566
gmk
Guanylate kinase; Essential for recycling GMP and indirectly, cGMP (188 aa)
 
     
  0.561
PG_0804
Flavodoxin (402 aa)
              0.544
xseA
Exodeoxyribonuclease VII large subunit; Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides (460 aa)
   
   
  0.514
Your Current Organism:
Porphyromonas gingivalis W83
NCBI taxonomy Id: 242619
Other names: P. gingivalis W83, Porphyromonas gingivalis W83, Porphyromonas gingivalis str. W83, Porphyromonas gingivalis strain W83
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