STRINGSTRING
PG_0838 protein (Porphyromonas gingivalis W83) - STRING interaction network
"PG_0838" - Integrase in Porphyromonas gingivalis W83
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PG_0838Integrase (432 aa)    
Predicted Functional Partners:
PG_0841
Mobilizable transposon, excision protein (297 aa)
 
     
  0.805
PG_0843
Hypothetical protein (103 aa)
 
          0.780
PG_0842
Mobilizable transposon protein (354 aa)
   
          0.775
PG_0839
Hypothetical protein (393 aa)
   
     
  0.717
PG_0868
Mobilization protein (307 aa)
   
          0.705
PG_0848
Hypothetical protein (332 aa)
   
          0.661
PG_0849
Hypothetical protein (256 aa)
 
          0.658
PG_1441
Lysozyme-like protein (55 aa)
   
          0.604
PG_0541
Hypothetical protein (99 aa)
   
          0.593
PG_1109
Mobilization protein (455 aa)
   
          0.530
Your Current Organism:
Porphyromonas gingivalis W83
NCBI taxonomy Id: 242619
Other names: P. gingivalis W83, Porphyromonas gingivalis W83, Porphyromonas gingivalis str. W83, Porphyromonas gingivalis strain W83
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