STRINGSTRING
PG_0850 protein (Porphyromonas gingivalis W83) - STRING interaction network
"PG_0850" - Excisionase DNA-binding protein in Porphyromonas gingivalis W83
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PG_0850Excisionase DNA-binding protein (102 aa)    
Predicted Functional Partners:
PG_0851
Hypothetical protein (388 aa)
 
          0.967
PG_0848
Hypothetical protein (332 aa)
 
          0.854
PG_0849
Hypothetical protein (256 aa)
 
          0.851
PG_1534
Hypothetical protein (129 aa)
 
          0.788
PG_1533
TOPRIM domain-containing protein (682 aa)
 
          0.782
PG_1485
Conjugative transposon protein TraC (128 aa)
   
          0.775
PG_1474
Conjugative transposon protein TraO (192 aa)
   
          0.775
PG_1494
Hypothetical protein (437 aa)
   
          0.774
PG_1470
Hypothetical protein (76 aa)
   
          0.753
PG_0816
Hypothetical protein (157 aa)
   
          0.752
Your Current Organism:
Porphyromonas gingivalis W83
NCBI taxonomy Id: 242619
Other names: P. gingivalis W83, Porphyromonas gingivalis W83, Porphyromonas gingivalis str. W83, Porphyromonas gingivalis strain W83
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