STRINGSTRING
PG_0873 protein (Porphyromonas gingivalis W83) - STRING interaction network
"PG_0873" - Mobilizable transposon, TnpC protein in Porphyromonas gingivalis W83
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PG_0873Mobilizable transposon, TnpC protein (232 aa)    
Predicted Functional Partners:
PG_0874
Mobilizable transposon, int protein (367 aa)
 
          0.917
PG_0875
Mobilizable transposon, TnpA protein (300 aa)
 
          0.865
PG_0872
Mobilizable transposon, Xis protein (119 aa)
 
          0.780
PG_0871
Hypothetical protein (458 aa)
   
          0.767
PG_0870
Hypothetical protein (352 aa)
   
          0.716
PG_0413
Hypothetical protein (114 aa)
   
          0.606
PG_0602
Hypothetical protein (346 aa)
   
          0.514
PG_1481
Conjugative transposon protein TraG (841 aa)
   
          0.504
PG_0026
Hypothetical protein (1123 aa)
   
          0.468
PG_0884
Hypothetical protein (416 aa)
 
          0.461
Your Current Organism:
Porphyromonas gingivalis W83
NCBI taxonomy Id: 242619
Other names: P. gingivalis W83, Porphyromonas gingivalis W83, Porphyromonas gingivalis str. W83, Porphyromonas gingivalis strain W83
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