STRINGSTRING
lacZ-2 protein (Porphyromonas gingivalis W83) - STRING interaction network
"lacZ-2" - Beta-galactosidase in Porphyromonas gingivalis W83
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lacZ-2Beta-galactosidase (1017 aa)    
Predicted Functional Partners:
galK
Galactokinase (384 aa)
 
   
  0.766
PG_1884
alpha-L-fucosidase (674 aa)
 
        0.585
folA
Dihydrofolate reductase; Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis (162 aa)
           
  0.529
PG_0011
Glycosyl hydrolase (1003 aa)
         
  0.513
pepT
Peptidase T; Cleaves the N-terminal amino acid of tripeptides (405 aa)
       
 
  0.501
polA
DNA polymerase type I (926 aa)
   
   
  0.499
PG_0085
Alpha-galactosidase (434 aa)
   
        0.485
galM
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer (355 aa)
   
   
  0.480
galE
UDP-glucose 4-epimerase (342 aa)
         
  0.475
pepD-2
Aminoacyl-histidine dipeptidase (486 aa)
       
 
  0.469
Your Current Organism:
Porphyromonas gingivalis W83
NCBI taxonomy Id: 242619
Other names: P. gingivalis W83, Porphyromonas gingivalis W83, Porphyromonas gingivalis str. W83, Porphyromonas gingivalis strain W83
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