STRINGSTRING
PG_0897 protein (Porphyromonas gingivalis W83) - STRING interaction network
"PG_0897" - Alpha-amylase in Porphyromonas gingivalis W83
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PG_0897Alpha-amylase (534 aa)    
Predicted Functional Partners:
glgB
1,4-alpha-glucan branching enzyme (668 aa)
 
   
    0.866
malQ
4-alpha-glucanotransferase (658 aa)
 
   
    0.849
malP
Maltodextrin phosphorylase (856 aa)
   
   
    0.839
rnhA
Ribonuclease H (216 aa)
   
          0.670
PG_0898
Hypothetical protein (263 aa)
              0.639
PG_2170
Sugar transporter (429 aa)
   
          0.574
PG_1042
Glycogen synthase (548 aa)
   
   
    0.493
PG_1209
Hypothetical protein (516 aa)
   
          0.457
PG_0746
Sensor histidine kinase (455 aa)
   
          0.446
PG_0283
RND family efflux transporter MFP subunit (416 aa)
   
          0.433
Your Current Organism:
Porphyromonas gingivalis W83
NCBI taxonomy Id: 242619
Other names: P. gingivalis W83, Porphyromonas gingivalis W83, Porphyromonas gingivalis str. W83, Porphyromonas gingivalis strain W83
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