STRINGSTRING
PG_0947 protein (Porphyromonas gingivalis W83) - STRING interaction network
"PG_0947" - Hypothetical protein in Porphyromonas gingivalis W83
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PG_0947Hypothetical protein (157 aa)    
Predicted Functional Partners:
PG_0946
ABC transporter ATP-binding protein (319 aa)
              0.861
PG_0945
ABC transporter permease (442 aa)
              0.861
PG_0948
AMP nucleosidase (258 aa)
 
          0.814
PG_0949
Hypothetical protein (335 aa)
 
          0.799
lspA
Lipoprotein signal peptidase; This protein specifically catalyzes the removal of signal peptides from prolipoproteins (226 aa)
 
          0.766
PG_1217
Hypothetical protein (110 aa)
   
          0.765
PG_2044
Hypothetical protein (251 aa)
   
          0.730
PG_1367
Hypothetical protein (200 aa)
   
          0.698
lepB
Signal peptidase I (465 aa)
   
          0.653
PG_1430
Hypothetical protein (228 aa)
   
          0.606
Your Current Organism:
Porphyromonas gingivalis W83
NCBI taxonomy Id: 242619
Other names: P. gingivalis W83, Porphyromonas gingivalis W83, Porphyromonas gingivalis str. W83, Porphyromonas gingivalis strain W83
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