STRINGSTRING
ppdK protein (Porphyromonas gingivalis W83) - STRING interaction network
"ppdK" - Pyruvate phosphate dikinase in Porphyromonas gingivalis W83
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ppdKPyruvate phosphate dikinase (908 aa)    
Predicted Functional Partners:
maeB
Malic enzyme (759 aa)
   
 
  0.909
guaB
Inosine 5-monophosphate dehydrogenase (498 aa)
       
  0.896
eno
Enolase; Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis (425 aa)
   
 
  0.867
mdh
Malate dehydrogenase (334 aa)
     
 
  0.853
pta
Phosphotransacetylase (336 aa)
   
 
  0.831
PG_0249
Oxaloacetate decarboxylase (619 aa)
       
  0.794
PG_1327
Aminotransferase (436 aa)
   
 
  0.788
mmdC
methylmalonyl-CoA decarboxylase subunit gamma (144 aa)
       
  0.788
PG_2171
D-isomer specific 2-hydroxyacid dehydrogenase (319 aa)
   
 
  0.775
hprA
Glycerate dehydrogenase (317 aa)
   
 
  0.775
Your Current Organism:
Porphyromonas gingivalis W83
NCBI taxonomy Id: 242619
Other names: P. gingivalis W83, Porphyromonas gingivalis W83, Porphyromonas gingivalis str. W83, Porphyromonas gingivalis strain W83
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