STRINGSTRING
PG_1034 protein (Porphyromonas gingivalis W83) - STRING interaction network
"PG_1034" - ABC transporter ATP-binding protein in Porphyromonas gingivalis W83
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PG_1034ABC transporter ATP-binding protein (244 aa)    
Predicted Functional Partners:
PG_1033
Hypothetical protein (248 aa)
 
 
  0.997
PG_1035
Hypothetical protein (496 aa)
              0.859
PG_0628
ABC transporter ATP-binding protein (251 aa)
 
   
 
0.679
uvrA-1
Excinuclease ABC subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate (967 aa)
              0.644
tsaD
O-sialoglycoprotein endopeptidase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction (341 aa)
   
        0.591
PG_1038
UvrD/PcrA/Rep family ATP-dependent DNA helicase (765 aa)
   
        0.589
PG_1037
Hypothetical protein (459 aa)
              0.581
PG_2139
Hypothetical protein (159 aa)
   
          0.535
PG_0784
Polyprenyl synthetase (325 aa)
 
        0.519
PG_1032
ISPg3, transposase (300 aa)
              0.491
Your Current Organism:
Porphyromonas gingivalis W83
NCBI taxonomy Id: 242619
Other names: P. gingivalis W83, Porphyromonas gingivalis W83, Porphyromonas gingivalis str. W83, Porphyromonas gingivalis strain W83
Server load: low (4%) [HD]