Co-purification, co-crystallization, Yeast2Hybrid, Genetic Interactions, etc ... as imported from primary sources.
Genes that are sometimes fused into single open reading frames.
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Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
colored nodes: query proteins and first shell of interactors
white nodes: second shell of interactors
empty nodes: proteins of unknown 3D structure
filled nodes: some 3D structure is known or predicted
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
from curated databases
OmpA family protein (672 aa)
Predicted Functional Partners:
Hypothetical protein; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds (197 aa)
Hypothetical protein (506 aa)
Hypothetical protein (827 aa)
Hypothetical protein (139 aa)
Hypothetical protein (776 aa)
GMP synthase; Catalyzes the synthesis of GMP from XMP (506 aa)
porT protein (244 aa)
Hypothetical protein (313 aa)
Hypothetical protein (302 aa)
Hypothetical protein (1160 aa)
Your Current Organism:
Porphyromonas gingivalis W83
NCBI taxonomy Id: 242619 Other names: P. gingivalis W83, Porphyromonas gingivalis W83, Porphyromonas gingivalis str. W83, Porphyromonas gingivalis strain W83