STRINGSTRING
PG_1072 protein (Porphyromonas gingivalis W83) - STRING interaction network
"PG_1072" - MutS family protein in Porphyromonas gingivalis W83
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PG_1072MutS family protein (463 aa)    
Predicted Functional Partners:
PG_1071
Hypothetical protein (322 aa)
 
          0.978
kamE
D-lysine 5,6-aminomutase subunit beta (263 aa)
 
     
  0.960
kamD
D-lysine 5,6-aminomutase subunit alpha (523 aa)
 
     
  0.952
PG_1069
Zinc-containing alcohol dehydrogenase (347 aa)
 
          0.828
kamA
L-lysine 2,3-aminomutase (416 aa)
         
  0.804
mutL
DNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a "molecular matchmaker", a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex (618 aa)
 
     
  0.793
PG_1067
Hypothetical protein (129 aa)
 
          0.727
PG_1075
Coenzyme A transferase subunit beta (220 aa)
              0.714
rpoD
RNA polymerase sigma-70 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released (287 aa)
   
      0.673
PG_1068
Hypothetical protein (273 aa)
 
          0.645
Your Current Organism:
Porphyromonas gingivalis W83
NCBI taxonomy Id: 242619
Other names: P. gingivalis W83, Porphyromonas gingivalis W83, Porphyromonas gingivalis str. W83, Porphyromonas gingivalis strain W83
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