Proteins whose genes are observed to be correlated in expression, across a large number of experiments.
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Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
colored nodes: query proteins and first shell of interactors
white nodes: second shell of interactors
empty nodes: proteins of unknown 3D structure
filled nodes: some 3D structure is known or predicted
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
from curated databases
D-lysine 5,6-aminomutase subunit beta (263 aa)
Predicted Functional Partners:
D-lysine 5,6-aminomutase subunit alpha (523 aa)
Zinc-containing alcohol dehydrogenase (347 aa)
Hypothetical protein (322 aa)
MutS family protein (463 aa)
L-lysine 2,3-aminomutase (416 aa)
Hypothetical protein (129 aa)
Coenzyme A transferase subunit beta (220 aa)
Hypothetical protein (273 aa)
S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme (429 aa)
Anaerobic ribonucleoside-triphosphate reductase activating protein; Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5’-deoxy-adenosine (163 aa)
Your Current Organism:
Porphyromonas gingivalis W83
NCBI taxonomy Id: 242619 Other names: P. gingivalis W83, Porphyromonas gingivalis W83, Porphyromonas gingivalis str. W83, Porphyromonas gingivalis strain W83