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PG_1080 protein (Porphyromonas gingivalis W83) - STRING interaction network
"PG_1080" - 3-hydroxyacyl-CoA dehydrogenase in Porphyromonas gingivalis W83
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PG_10803-hydroxyacyl-CoA dehydrogenase (281 aa)    
Predicted Functional Partners:
PG_1079
enoyl-CoA hydratase/isomerase (256 aa)
  0.999
acdA
acyl-CoA dehydrogenase (379 aa)
 
  0.990
PG_0775
acyl-CoA dehydrogenase (573 aa)
 
  0.978
etfA-2
Electron transfer flavoprotein subunit alpha (335 aa)
   
  0.953
etfA-1
Electron transfer flavoprotein subunit alpha (339 aa)
   
  0.924
menB
Naphthoate synthase; Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA) (272 aa)
     
    0.890
fabG
3-oxoacyl-ACP reductase (248 aa)
       
  0.864
maeB
Malic enzyme (759 aa)
       
  0.817
pta
Phosphotransacetylase (336 aa)
       
  0.806
pruA
Delta-1-pyrroline-5-carboxylate dehydrogenase (543 aa)
 
 
  0.806
Your Current Organism:
Porphyromonas gingivalis W83
NCBI taxonomy Id: 242619
Other names: P. gingivalis W83, Porphyromonas gingivalis W83, Porphyromonas gingivalis str. W83, Porphyromonas gingivalis strain W83
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