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uraA protein (Porphyromonas gingivalis W83) - STRING interaction network
"uraA" - Uracil permease in Porphyromonas gingivalis W83
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
uraAUracil permease (395 aa)    
Predicted Functional Partners:
pyrB
Aspartate carbamoyltransferase (304 aa)
   
   
  0.812
PG_1125
Hypothetical protein (218 aa)
              0.801
pyrH
Uridylate kinase; Catalyzes the reversible phosphorylation of UMP to UDP (239 aa)
     
 
  0.767
der
GTP-binding protein EngA; GTPase that plays an essential role in the late steps of ribosome biogenesis (437 aa)
   
 
    0.747
upp
Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate (216 aa)
 
   
  0.742
cmk
Cytidylate kinase (231 aa)
       
    0.741
carA
Carbamoyl phosphate synthase small subunit (357 aa)
   
   
  0.707
guaB
Inosine 5-monophosphate dehydrogenase (498 aa)
   
   
  0.706
PG_1124
ATP-cob(I)alamin adenosyltransferase (183 aa)
              0.689
xpt
Xanthine phosphoribosyltransferase; Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5’-monophosphate (XMP), so it can be reused for RNA or DNA synthesis (193 aa)
   
   
  0.687
Your Current Organism:
Porphyromonas gingivalis W83
NCBI taxonomy Id: 242619
Other names: P. gingivalis W83, Porphyromonas gingivalis W83, Porphyromonas gingivalis str. W83, Porphyromonas gingivalis strain W83
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