STRINGSTRING
PG_1133 protein (Porphyromonas gingivalis W83) - STRING interaction network
"PG_1133" - Hypothetical protein in Porphyromonas gingivalis W83
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PG_1133Hypothetical protein (150 aa)    
Predicted Functional Partners:
PG_1139
Hypothetical protein (378 aa)
   
          0.772
valS
valyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a "posttransfer" editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner (876 aa)
              0.759
PG_0413
Hypothetical protein (114 aa)
   
          0.729
PG_1316
Hypothetical protein (176 aa)
   
          0.708
PG_0910
FHA domain-containing protein (190 aa)
   
          0.705
PG_0291
Hypothetical protein (361 aa)
   
          0.692
PG_2094
Hypothetical protein (1515 aa)
   
          0.690
PG_1388
Hypothetical protein (264 aa)
   
          0.689
PG_0961
Hypothetical protein (109 aa)
   
          0.689
PG_0607
Hypothetical protein (120 aa)
   
          0.678
Your Current Organism:
Porphyromonas gingivalis W83
NCBI taxonomy Id: 242619
Other names: P. gingivalis W83, Porphyromonas gingivalis W83, Porphyromonas gingivalis str. W83, Porphyromonas gingivalis strain W83
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