STRINGSTRING
trxB protein (Porphyromonas gingivalis W83) - STRING interaction network
"trxB" - Thioredoxin reductase in Porphyromonas gingivalis W83
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
trxBThioredoxin reductase (313 aa)    
Predicted Functional Partners:
trx
Thioredoxin (104 aa)
 
  0.988
PG_0618
Alkyl hydroperoxide reductase (188 aa)
   
 
  0.980
PG_2042
Thioredoxin family protein (336 aa)
   
 
  0.864
PG_1084
Thioredoxin family protein (358 aa)
   
 
  0.864
PG_0275
Thioredoxin family protein (169 aa)
   
 
  0.863
PG_1638
Thioredoxin family protein (328 aa)
   
 
  0.863
PG_2175
Hypothetical protein (160 aa)
   
 
  0.860
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP (506 aa)
         
  0.818
fumB
Fumarate hydratase class I, anaerobic (548 aa)
       
    0.798
uvrA-2
Excinuclease ABC subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate (952 aa)
         
  0.700
Your Current Organism:
Porphyromonas gingivalis W83
NCBI taxonomy Id: 242619
Other names: P. gingivalis W83, Porphyromonas gingivalis W83, Porphyromonas gingivalis str. W83, Porphyromonas gingivalis strain W83
Server load: low (7%) [HD]