STRINGSTRING
PG_1200 protein (Porphyromonas gingivalis W83) - STRING interaction network
"PG_1200" - Hypothetical protein in Porphyromonas gingivalis W83
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PG_1200Hypothetical protein (170 aa)    
Predicted Functional Partners:
PG_1685
Hypothetical protein (260 aa)
   
          0.621
PG_0853
Histone-like family DNA-binding protein (161 aa)
   
          0.614
PG0853
Histone-like family DNA-binding protein (161 aa)
   
          0.614
PG_2020
CRISPR-associated Cas5e family protein (221 aa)
   
          0.606
PG_0366
Hypothetical protein (186 aa)
   
          0.543
PG_1302
Hypothetical protein (232 aa)
   
          0.487
PG_0822
Hypothetical protein (135 aa)
   
          0.481
PG_1451
Hypothetical protein (135 aa)
   
          0.480
PG_0449
Hypothetical protein (460 aa)
   
          0.474
PG_1205
Histone-like family DNA-binding protein (156 aa)
   
          0.450
Your Current Organism:
Porphyromonas gingivalis W83
NCBI taxonomy Id: 242619
Other names: P. gingivalis W83, Porphyromonas gingivalis W83, Porphyromonas gingivalis str. W83, Porphyromonas gingivalis strain W83
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